In this article the authors proposes to use the scanning force
microscope to aid in volume determination of selected specimens.
The scanning force microscope itself is able to yield a three
dimensional topographical image of the surface of specimens.
The authors chose to use the scanning force microscope over other
microscopes such as the transmission electron microscope (TEM)
because of their ability to directly determine the volume of
specimens. In this particular case the authors were able to use
the unique features of the scanning force microscope to aid in
the volume determination of human metaphase chromosomes.
To begin with the authors had to prepare specimens to undergo
the procedure. They point out that because of the variety of
differences and techniques in specimen preparation that there
will exist a degree of variability in volume determination for
the same specimen. Thus, any data yielded by their experiment
should be seen as the apparent volume determination
for that particular specimen. In the case of human metaphase
chromosomes the author chose to use the air dry technique because
of its conventional use in karyotyping.
The algorithm used in calculating volume determination involved
a complex series of steps in which the image generated was broken
down and analyzed. Images of the specimens in questions were
separated from background images sand artifacts so as not to have
these influence the true volume determination. The authors explain
their difficulty in choosing a critical point for the algorithm
(in order to cut off the specimen from the background) and the
consequences of choosing a value that was either too high or too
low. In the end they chose to use a value one height unit above
the highest background feature. After that the volume of the
specimen could be determined by integrating the height values
of the remaining image (i.e. the true specimen)
The numerical value obtained for the volume determination of
human metaphase chromosomes was 25.5 +/- 3.4 mm3 . These results
using this method were found to be comparable and in some cases
even more accurate that those used by other more conventional
methods such as TEM. The authors plan to due further studies
with other specimens and compare their data with that obtained
by other methods as a further application of this novel method.